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[MCE] RNA interference_ A Simple but Powerful Tool for Targeted Gene Silencing

[MCE] RNA interference_ A Simple but Powerful Tool for Targeted Gene Silencing


High-Quality Oligonucleotides for Effective RNA Interference

RNA Interference and Gene Silencing
RNA interference (RNAi) is a highly specific gene silencing mechanism mediated by RNA molecules. Unlike conventional inhibitors, RNAi offers unrestricted target sites, high specificity, and low toxicity. Key oligonucleotides in RNAi include small interfering RNA (siRNA), microRNA (miRNA), and antisense oligonucleotides (ASOs). These oligonucleotides bind to target mRNA sequences, inducing degradation or translational inhibition to silence genes[1].
miRNA-Based Tools
miRNA mimics: Synthetic double-stranded RNAs that can function like endogenous miRNAs they try to mimic.
miRNA inhibitors: Single-stranded oligonucleotides with complementary sequences that bind to target miRNAs and block their biological functions.
siRNA Applications
In vitro : MedChemExpress (MCE) provides pre-designed kits (human/mouse/rat) include three siRNA pairs per target, ensuring ≥70% mRNA knockdown (transfection efficiency >80%).
In vivo : Requires chemical modifications for optimal results. Custom siRNAs modifications (e.g., GalNAc conjugation) enhance stability for animal studies[2].
Antisense Oligonucleotides (ASOs)
ASOs target RNA via complementary binding, regulating gene expression by splicing, transcription, and translation (Figure 1)[3]. Applications include mRNA knockdown[3], pre-mRNA
alternative splicing modulation[3], 5’ cap formation inhibition[3], and poly(A) tail regulation[4]. The cellular stability of ASO is often enhanced by chemical modifications (e.g., LNA (locked nucleic acid), PS (phosphorothioate)). MCE offers custom ASOs with stability-enhancing modifications.
Figure 1. Regulation of target transcripts by single-stranded ASOs[3].
MCE Provides 45,000+ Oligonucleotides for Customers
Product Name Description
Patisiran
Sodium
siRNA targeting transthyretin (TTR) mRNA

Inclisiran Sodium
siRNA inhibits the transcription of PCSK9.

MicroRNA Mimic Negative Control
21-nucleotide synthetic miRNA, negative control for
miRNA experiments

Fomivirsen Sodium
21-mer phosphorothioate-modified ASO, targets
cytomegalovirus (CMV) RNA

Nusinersen Sodium
SMN2 splicing modifier (spinal muscular atrophy)

Mipomersen Sodium
Antisense oligonucleotide inhibitor of Apolipoprotein B
(apoB)

Inotersen Sodium
Targets Transthyretin (TTR) transcript, reduces the
levels of the TTR protein.

Givosiran
ALAS1-targeted siRNA (acute hepatic porphyria)

Bepirovirsen Sodium
Antisense oligonucleotide targeting all HBV mRNAs.

Tofersen Sodium
Targets superoxide dismutase 1 (SOD1) mRNA, reduces the
synthesis of SOD1 protein.
References:
[1] Weng Y, et al. Biotechnol Adv. 2019 Sep-Oct;37(5):801-825.
[2] Ebenezer O, et al. Int J Mol Sci. 2023 Feb 16;24(4):4019.
[3] Crooke, S.T., et al. Nat Rev Drug Discov. 2021 Jun;20(6):427-453.
[4] Yuan F, et al. Genes Dis . 2019 Oct 25;8(1):61-72.